This article describes steps used in generating prompt gammas (PG) in proton radiotherapy for tests of Compton cameras using this software.
Work was mostly performed by Kristijan Kuhar
(kristijan.kuhar@gmail.com).
It derives heavily from vpgtle code desribed here. In essence, the PG track simulation …
read moreThe received certificates must be imported to web browsers. Below, screenshots for Firefox are shown, but procedure is similar for other browsers as well.
First, store the certificates to a safe place on your disk.
Start your browser, go to preferences. Usually …
read moreIn Labkey, variables can only be displayed in a datasets when their visitID match. Since that is hard to achieve in retrospective studies, a more flexible manner of visit matching is required. This infrastructure provides means to match variables from non-matching visits using …
read moreStart a new database instance:
pg_ctl init -d TEST
pg_ctl -D TEST -o "-p 5433" start
Connect to the new database instance
psql -p 5433
Check username and current database:
select current_user;
select current_database();
Create and connect to a database:
create database test;
\c test;
Create the …
read moreOnly manual install is available, sorted by components.
Download sources and unpackage them to /usr/share. This should create
/usr/share/pgsql directory which we will rename to postgres:
$>sudo mv /usr/share/pgsql /usr/share/postgres
Now, create a user postgres with home …
Grab the software and run the exe. It should install MySQL, Java, Tomcat and Labkey binaries. Original Labkey advice here. Skip the registration steps etc. The configuration is described here.
Manual install is required. Failed for some older PC configurations and operating systems (32-bit …
read moreSome files (most noteable MR files from Embrace study) use Lossless JPEG compresion. The exact transfer syntax is:
JPEG Lossless, Non-hierarchical, 1st Order Prediction
The import of such files on some systems (newer MITK, most UNIX implementations) fails. A stackoverflow discussion member claims that:
read moreMost toolkit …
debian@med0:~$ sudo /usr/sbin/apachectl -V
AH00557: apache2: apr_sockaddr_info_get() failed for med0
AH00558: apache2: Could not reliably determine the server's fully qualified domain name, using 127.0.0.1. Set the 'ServerName' directive globally to suppress this message
Server version: Apache/2.4.25 (Debian)
Server …Slicer can be downloaded from the official site. The following was done using the stable release, that uses Python 2.7.X
Labkey extension is available on gitlab. For using git, see tutorial at medfiz Owncloud site. I assume you downloaded labkeySlicerPythonAPI somewhere on your computer using …
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